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Browsing by Author Stephen D. Bentley

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Showing results 1 to 13 of 13
Issue DateTitleAuthor(s)
29-Jun-2004Complete genomes of two clinical Staphylococcus aureus strains: Evidence for the evolution of virulence and drug resistanceMatthew T.G. Holden; Edward J. Feil; Jodi A. Lindsay; Sharon J. Peacock; Nicholas P.J. Day; Mark C. Enright; Tim J. Foster; Catrin E. Moore; Laurence Hurst; Rebecca Atkin; Andrew Barron; Nathalie Bason; Stephen D. Bentley; Carol Chillingworth; Tracey Chillingworth; Carol Churcher; Louise Clark; Craig Corton; Ann Cronin; Jon Doggett; Linda Dowd; Theresa Feltwell; Zahra Hance; Barbara Harris; Heidi Hauser; Simon Holroyd; Kay Jagels; Keith D. James; Nicola Lennard; Alexandra Line; Rebecca Mayes; Sharon Moule; Karen Mungall; Douglas Ormond; Michael A. Quail; Ester Rabbinowitsch; Kim Rutherford; Mandy Sanders; Sarah Sharp; Mark Simmonds; Kim Stevens; Sally Whitehead; Bart G. Barrell; Brian G. Spratt; Julian Parkhill; Wellcome Trust Sanger Institute; University of Bath; St George's University of London; Nuffield Department of Clinical Medicine; Trinity College Dublin; St Mary's Hospital London; Mahidol University
7-Aug-2014Comprehensive Identification of Single Nucleotide Polymorphisms Associated with Beta-lactam Resistance within Pneumococcal Mosaic GenesClaire Chewapreecha; Pekka Marttinen; Nicholas J. Croucher; Susannah J. Salter; Simon R. Harris; Alison E. Mather; William P. Hanage; David Goldblatt; Francois H. Nosten; Claudia Turner; Paul Turner; Stephen D. Bentley; Julian Parkhill; Wellcome Trust Sanger Institute; Harvard School of Public Health; Aalto University; Imperial College London; UCL Institute of Child Health; Mahidol University; Nuffield Department of Clinical Medicine; Angkor Hospital for Children; University of Cambridge
1-Jan-2014Dense genomic sampling identifies highways of pneumococcal recombinationClaire Chewapreecha; Simon R. Harris; Nicholas J. Croucher; Claudia Turner; Pekka Marttinen; Lu Cheng; Alberto Pessia; David M. Aanensen; Alison E. Mather; Andrew J. Page; Susannah J. Salter; David Harris; Francois Nosten; David Goldblatt; Jukka Corander; Julian Parkhill; Paul Turner; Stephen D. Bentley; Wellcome Trust Sanger Institute; St Mary's Hospital London; Mahidol University; Nuffield Department of Clinical Medicine; Aalto University; Helsingin Yliopisto; UCL Institute of Child Health; Abo Akademi University; University of Cambridge
1-Jan-2014Evidence for soft selective sweeps in the evolution of pneumococcal multidrug resistance and vaccine escapeNicholas J. Croucher; Claire Chewapreecha; William P. Hanage; Simon R. Harris; Lesley McGee; Mark Van Der Linden; Jae Hoon Song; Kwan Soo Ko; Herminia De Lencastre; Claudia Turner; Fan Yang; Raquel Sa-Leao; Bernard Beall; Keith P. Klugman; Julian Parkhill; Paul Turner; Stephen D. Bentley; Harvard School of Public Health; Wellcome Trust Sanger Institute; National Center for Immunization and Respiratory Diseases; Medizinische Fakultat und Universitats Klinikum Aachen; Sungkyunkwan University; Instituto de Tecnologia Quimica e Biologica - Univesidade Nova de Lisboa; Rockefeller University; Mahidol University; Nuffield Department of Clinical Medicine; Huashan Hospital; Emory University; National Institute for Communicable Diseases; University of Cambridge
22-Jan-2010Evolution of MRSA during hospital transmission and intercontinental spreadSimon R. Harris; Edward J. Feil; Matthew T.G. Holden; Michael A. Quail; Emma K. Nickerson; Narisara Chantratita; Susana Gardete; Ana Tavares; Nick Day; Jodi A. Lindsay; Jonathan D. Edgeworth; Hermínia De Lencastre; Julian Parkhill; Sharon J. Peacock; Stephen D. Bentley; Wellcome Trust Sanger Institute; University of Bath; Mahidol University; University of Cambridge; Instituto de Tecnologia Quimica e Biologica - Univesidade Nova de Lisboa; Rockefeller University; Nuffield Department of Clinical Medicine; St George's University of London; King's College London; Guy's and St Thomas' NHS Foundation Trust
25-Jul-2017Genome-wide identification of lineage and locus specific variation associated with pneumococcal carriage durationJohn A. Lees; Nicholas J. Croucher; David Goldblatt; François Nosten; Julian Parkhill; Claudia Turner; Paul Turner; Stephen D. Bentley; Wellcome Trust Sanger Institute; Imperial College London; UCL Institute of Child Health; Mahidol University; Nuffield Department of Clinical Medicine; Angkor Hospital for Children
1-Feb-2014Genomic identification of a novel co-trimoxazole resistance genotype and its prevalence amongst Streptococcus pneumoniae in MalawiJennifer E. Cornick; Simon R. Harris; Christopher M. Parry; Michael J. Moore; Chikondi Jassi; Arox Kamng'ona; Benard Kulohoma; Robert S. Heyderman; Stephen D. Bentley; Dean B. Everett; University of Malawi College of Medicine; University of Liverpool; Wellcome Trust Sanger Institute; Mahidol University; Nuffield Department of Clinical Medicine; Liverpool School of Tropical Medicine
28-Sep-2004Genomic plasticity of the causative agent of melioidosis, Burkholderia pseudomalleiMatthew T.G. Holden; Richard W. Titball; Sharon J. Peacock; Ana M. Cerdeño-Tárraga; Timothy Atkins; Lisa C. Crossman; Tyrone Pitt; Carol Churcher; Karen Mungall; Stephen D. Bentley; Mohammed Sebaihia; Nicholas R. Thomson; Mathalie Bason; Ifor R. Beacham; Karen Brooks; Katherine A. Brown; Nat F. Brown; Greg L. Challis; Inna Cherevach; Tracy Chillingworth; Ann Cronin; Ben Crossett; Paul Davis; David DeShazer; Theresa Feltwell; Audrey Fraser; Zahra Hance; Heidi Hauser; Simon Holroyd; Kay Jagels; Karen E. Keith; Mark Maddison; Sharon Moule; Claire Price; Michael A. Quail; Ester Rabbinowitsch; Kim Rutherford; Mandy Sanders; Mark Simmonds; Sirirurg Songsivilai; Kim Stevens; Sarinna Tumapa; Monkgol Vesaratchavest; Sally Whitehead; Corin Yeats; Bart G. Barrell; Petra C.F. Oyston; Julian Parkhill; Wellcome Trust Sanger Institute; Defence Science and Technology Laboratory; London School of Hygiene & Tropical Medicine; Nuffield Department of Clinical Medicine; Mahidol University; Central Public Health Laboratory; Griffith University; Imperial College London; The University of Warwick; U.S. Army Medical Research Institute of Infectious Diseases
1-Jan-2014Global phylogenomic analysis of nonencapsulated Streptococcus pneumoniae reveals a deep-branching classic lineage that is distinct from multiple sporadic lineagesMarkus Hilty; Daniel Wüthrich; Susannah J. Salter; Hansjürg Engel; Samuel Campbell; Raquel Sá-Leão; Hermínia De Lencastre; Peter Hermans; Ewa Sadowy; Paul Turner; Claire Chewapreecha; Mathew Diggle; Gerd Pluschke; Lesley McGee; Özgen Köseoʇlu Eser; Donald E. Low; Heidi Smith-Vaughan; Andrea Endimiani; Marianne Kü Ffer; Mélanie Dupasquier; Emmanuel Beaudoing; Johann Weber; Rémy Bruggmann; William P. Hanage; Julian Parkhill; Lucy J. Hathaway; Kathrin Mü Hlemann; Stephen D. Bentley; University of Bern; UniversitatsSpital Bern; Swiss Institute of Bioinformatics; Wellcome Trust Sanger Institute; Instituto de Tecnologia Quimica e Biologica - Univesidade Nova de Lisboa; Rockefeller University; Radboud University Nijmegen; National Medicines Institute, Warsaw; Mahidol University; Nuffield Department of Clinical Medicine; Queen's Medical Centre; Universitat Basel; National Center for Immunization and Respiratory Diseases; Hacettepe Universitesi; Mount Sinai Hospital of University of Toronto; Menzies School of Health Research; Universitat Lausanne Schweiz; Harvard School of Public Health; University of Cambridge
1-Jul-2010High rates of homologous recombination in the mite endosymbiont and opportunistic human pathogen orientia tsutsugamushiPiengchan Sonthayanon; Sharon J. Peacock; Wirongrong Chierakul; Vanaporn Wuthiekanun; Stuart D. Blacksell; Mathew T.G. Holden; Stephen D. Bentley; Edward J. Feil; Nicholas P.J. Day; Mahidol University; University of Cambridge; Wellcome Trust Sanger Institute; University of Bath; Nuffield Department of Clinical Medicine
1-May-2011Improved detection of nasopharyngeal cocolonization by multiple pneumococcal serotypes by use of latex agglutination or molecular serotyping by microarrayPaul Turner; Jason Hinds; Claudia Turner; Auscharee Jankhot; Katherine Gould; Stephen D. Bentley; François Nosten; David Goldblatt; Shoklo Malaria Research Unit; Mahidol University; University of Oxford; St George's University of London; Wellcome Trust Sanger Institute; UCL Institute of Child Health
1-Feb-2017Interacting networks of resistance, virulence and core machinery genes identified by genome-wide epistasis analysisMarcin J. Skwark; Nicholas J. Croucher; Santeri Puranen; Claire Chewapreecha; Maiju Pesonen; Ying Ying Xu; Paul Turner; Simon R. Harris; Stephen B. Beres; James M. Musser; Julian Parkhill; Stephen D. Bentley; Erik Aurell; Jukka Corander; Vanderbilt University; Imperial College London; Aalto University; University of Cambridge; Mahidol University; Nuffield Department of Clinical Medicine; Wellcome Trust Sanger Institute; Methodist Hospital Houston; Weill Cornell Medical College; The Royal Institute of Technology (KTH); Institute of Theoretical Physics Chinese Academy of Sciences; Helsingin Yliopisto; Universitetet i Oslo
24-Sep-2014Two-phase importance sampling for inference about transmission treesElina Numminen; Claire Chewapreecha; Jukka Sirén; Claudia Turner; Paul Turner; Stephen D. Bentley; Jukka Corander; Helsingin Yliopisto; Wellcome Trust; Mahidol University; Nuffield Department of Clinical Medicine; University of Cambridge