Browsing by Author Taane G. Clark

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Showing results 1 to 11 of 11
Issue DateTitleAuthor(s)
19-Jul-2012Analysis of Plasmodium falciparum diversity in natural infections by deep sequencingMagnus Manske; Olivo Miotto; Susana Campino; Sarah Auburn; Jacob Almagro-Garcia; Gareth Maslen; Jack O'Brien; Abdoulaye Djimde; Ogobara Doumbo; Issaka Zongo; Jean Bosco Ouedraogo; Pascal Michon; Ivo Mueller; Peter Siba; Alexis Nzila; Steffen Borrmann; Steven M. Kiara; Kevin Marsh; Hongying Jiang; Xin Zhuan Su; Chanaki Amaratunga; Rick Fairhurst; Duong Socheat; Francois Nosten; Mallika Imwong; Nicholas J. White; Mandy Sanders; Elisa Anastasi; Dan Alcock; Eleanor Drury; Samuel Oyola; Michael A. Quail; Daniel J. Turner; Valentin Ruano-Rubio; Dushyanth Jyothi; Lucas Amenga-Etego; Christina Hubbart; Anna Jeffreys; Kate Rowlands; Colin Sutherland; Cally Roper; Valentina Mangano; David Modiano; John C. Tan; Michael T. Ferdig; Alfred Amambua-Ngwa; David J. Conway; Shannon Takala-Harrison; Christopher V. Plowe; Julian C. Rayner; Kirk A. Rockett; Taane G. Clark; Chris I. Newbold; Matthew Berriman; Bronwyn MacInnis; Dominic P. Kwiatkowski; Wellcome Trust Sanger Institute; University of Oxford; Mahidol University; Menzies School of Health Research; Wellcome Trust Centre for Human Genetics; University of Bamako Faculty of Medicine, Pharmacy and Odonto-Stomatology; Institut de Recherche en Sciences de la Santé; Papua New Guinea Institute of Medical Research; Wellcome Trust Research Laboratories Nairobi; National Institute of Allergy and Infectious Diseases; Cambodia National Malaria Centre; Shoklo Malaria Research Unit; Navrongo Health Centre; London School of Hygiene & Tropical Medicine; Universita degli Studi di Roma La Sapienza; University of Notre Dame; Medical Research Council Laboratories Gambia; University of Maryland, Baltimore; Weatherall Institute of Molecular Medicine
13-Jun-2014A barcode of organellar genome polymorphisms identifies the geographic origin of Plasmodium falciparum strainsMark D. Preston; Susana Campino; Samuel A. Assefa; Diego F. Echeverry; Harold Ocholla; Alfred Amambua-Ngwa; Lindsay B. Stewart; David J. Conway; Steffen Borrmann; Pascal Michon; Issaka Zongo; Jean Bosco Ouédraogo; Abdoulaye A. Djimde; Ogobara K. Doumbo; Francois Nosten; Arnab Pain; Teun Bousema; Chris J. Drakeley; Rick M. Fairhurst; Colin J. Sutherland; Cally Roper; Taane G. Clark; London School of Hygiene & Tropical Medicine; Wellcome Trust Sanger Institute; Purdue University; International Center for Medical Research and Training; University of Malawi; Malawi-Liverpool-Wellcome Trust Clinical Research Programme; Liverpool School of Tropical Medicine; Medical Research Council Laboratories Gambia; Wellcome Trust Research Laboratories Nairobi; Universitat Tubingen; Divine Word University; Institut de Recherche en Sciences de la Santé; University of Bamako Faculty of Medicine, Pharmacy and Odonto-Stomatology; Nuffield Department of Clinical Medicine; Mahidol University; King Abdullah University of Science and Technology; National Institutes of Health, Bethesda
29-Feb-2012Characterization of within-host plasmodium falciparum diversity using next-generation sequence dataSarah Auburn; Susana Campino; Olivo Miotto; Abdoulaye A. Djimde; Issaka Zongo; Magnus Manske; Gareth Maslen; Valentina Mangano; Daniel Alcock; Bronwyn MacInnis; Kirk A. Rockett; Taane G. Clark; Ogobara K. Doumbo; Jean Bosco Ouédraogo; Dominic P. Kwiatkowski; Wellcome Trust Sanger Institute; Menzies School of Health Research; University of Oxford; Mahidol University; University of Bamako Faculty of Medicine, Pharmacy and Odonto-Stomatology; Institut de Recherche en Sciences de la Santé; Universita degli Studi di Roma La Sapienza; Wellcome Trust Centre for Human Genetics; London School of Hygiene & Tropical Medicine
4-Jan-2013Effective Preparation of Plasmodium vivax Field Isolates for High-Throughput Whole Genome SequencingSarah Auburn; Jutta Marfurt; Gareth Maslen; Susana Campino; Valentin Ruano Rubio; Magnus Manske; Barbara MacHunter; Enny Kenangalem; Rintis Noviyanti; Leily Trianty; Boni Sebayang; Grennady Wirjanata; Kanlaya Sriprawat; Daniel Alcock; Bronwyn MacInnis; Olivo Miotto; Taane G. Clark; Bruce Russell; Nicholas M. Anstey; François Nosten; Dominic P. Kwiatkowski; Ric N. Price; Menzies School of Health Research; Wellcome Trust Sanger Institute; University of Oxford; Papuan Health and Community Development Foundation; Eijkman Institute for Molecular Biology; Shoklo Malaria Research Unit; Mahidol University; London School of Hygiene & Tropical Medicine; Yong Loo Lin School of Medicine; Royal Darwin Hospital; Nuffield Department of Clinical Medicine
2-Jan-2013Genetic loci associated with delayed clearance of plasmodium falciparum following artemisininShannon Takala-Harrison; Taane G. Clark; Christopher G. Jacob; Michael P. Cummings; Olivo Miotto; Arjen M. Dondorpe; Mark M. Fukuda; Francois Nosten; Harald Noedl; Mallika Imwong; Delia Bethell; Youry Se; Chanthap Lon; Stuart D. Tyner; David L. Saunders; Duong Socheat; Frederic Ariey; Aung Pyae Phyo; Peter Starzengruber; Hans Peter Fuehrer; Paul Swoboda; Kasia Stepniewska; Jennifer Flegg; Cesar Arze; Gustavo C. Cerqueira; Joana C. Silva; Stacy M. Ricklefs; Stephen F. Porcella; Robert M. Stephens; Matthew Adams; Leo J. Kenefic; Susana Campino; Sarah Auburn; Bronwyn MacInnis; Dominic P. Kwiatkowskid; Xin Zhuan Su; Nicholas J. White; Pascal Ringwald; Christopher V. Plowe; University of Maryland School of Medicine; London School of Tropical Medicine; University of Maryland; University of Oxford; Mahidol University; Armed Forces Research Institute of Medical Sciences, Thailand; Shoklo Malaria Research Unit; Medizinische Universitat Wien; Armed Forces Research Institute of Medical Sciences; University of Health Sciences; Institut Pasteur, Paris; University of Maryland, Baltimore; National Institutes of Health, Bethesda; Advanced Biomedical Computing Center; Wellcome Trust Sanger Institute; National Institute of Allergy and Infectious Diseases; Organisation Mondiale de la Sante
1-Jan-2016Genetic signatures of Mycobacterium tuberculosis Nonthaburi genotype revealed by whole genome analysis of isolates from tuberculous meningitis patients in ThailandOlabisi Oluwabukola Coker; Angkana Chaiprasert; Chumpol Ngamphiw; Sissades Tongsima; Sanjib Mani Regmi; Taane G. Clark; Rick Twee Hee Ong; Yik Ying Teo; Therdsak Prammananan; Prasit Palittapongarnpim; Mahidol University; Thailand National Center for Genetic Engineering and Biotechnology; Gandaki Medical College Teaching Hospital; London School of Hygiene & Tropical Medicine; National University of Singapore
1-Jun-2009Genome-wide and fine-resolution association analysis of malaria in West AfricaMuminatou Jallow; Yik Ying Teo; Kerrin S. Small; Kirk A. Rockett; Panos Deloukas; Taane G. Clark; Katja Kivinen; Kalifa A. Bojang; David J. Conway; Margaret Pinder; Giorgio Sirugo; Fatou Sisay-Joof; Stanley Usen; Sarah Auburn; Suzannah J. Bumpstead; Susana Campino; Alison Coffey; Andrew Dunham; Andrew E. Fry; Angela Green; Rhian Gwilliam; Sarah E. Hunt; Michael Inouye; Anna E. Jeffreys; Alieu Mendy; Aarno Palotie; Simon Potter; Jiannis Ragoussis; Jane Rogers; Kate Rowlands; Elilan Somaskantharajah; Pamela Whittaker; Claire Widden; Peter Donnelly; Bryan Howie; Jonathan Marchini; Andrew Morris; Miguel Sanjoaquin; Eric Akum Achidi; Tsiri Agbenyega; Angela Allen; Olukemi Amodu; Patrick Corran; Abdoulaye Djimde; Amagana Dolo; Ogobara K. Doumbo; Chris Drakeley; Sarah Dunstan; Jennifer Evans; Jeremy Farrar; Deepika Fernando; Tran Tinh Hien; Rolf D. Horstmann; Muntaser Ibrahim; Nadira Karunaweera; Gilbert Kokwaro; Kwadwo A. Koram; Martha Lemnge; Julie Makani; Kevin Marsh; Pascal Michon; David Modiano; Malcolm E. Molyneux; Ivo Mueller; Michael Parker; Norbert Peshu; Christopher V. Plowe; Odile Puijalon; John Reeder; Hugh Reyburn; Eleanor M. Riley; Anavaj Sakuntabhai; Pratap Singhasivanon; Sodiomon Sirima; Adama Tall; Terrie E. Taylor; Mahamadou Thera; Marita Troye-Blomberg; Thomas N. Williams; Michael Wilson; Dominic P. Kwiatkowski; Medical Research Council Laboratories Gambia; Wellcome Trust Centre for Human Genetics; Wellcome Trust Sanger Institute; University of Oxford; University of Malawi College of Medicine; University of Buea; Kwame Nkrumah University of Science and Technology; Papua New Guinea Institute of Medical Research; Weatherall Institute of Molecular Medicine; University of Ibadan; National Institute for Biological Standards and Control; University of Bamako; London School of Hygiene & Tropical Medicine; Kilimanjaro Christian Medical Centre; UCL; Bernhard Nocht Institut fur Tropenmedizin Hamburg; University of Colombo Faculty of Medicine; Khartoum University; Wellcome Trust Research Laboratories Nairobi; University of Ghana; National Institute for Medical Research Tanga; Muhimbili University of Health and Allied Sciences; Universita degli Studi di Roma La Sapienza; Blantyre Malaria Project; University of Maryland, Baltimore; Institut Pasteur, Paris; Mahidol University; Centre National de Recherche et de Formation sur le Paludisme; Lnstitut Pasteur de Dakar; Michigan State University; Department of Molecular Biosciences, The Wenner-Gren Institute
11-Jun-2012An in-solution hybridisation method for the isolation of pathogen DNA from human DNA-rich clinical samples for analysis by NGSMiriam Smith; Susana Campino; Yong Gu; Taane G. Clark; Thomas D. Otto; Gareth Maslen; Magnus Manske; Mallika Imwong; Arjen M. Dondorp; Dominic P. Kwiatkowski; Michael A. Quail; Harold Swerdlow; Wellcome Trust Sanger Institute; London School of Hygiene & Tropical Medicine; Mahidol University; Churchill Hospital; University of Oxford
1-Jun-2014Plasmo View: A web-based resource to visualise global Plasmodium falciparum genomic variationMark D. Preston; Samuel A. Assefa; Harold Ocholla; Colin J. Sutherland; Steffen Borrmann; Alexis Nzila; Pascal Michon; Tran Tinh Hien; Teun Bousema; Christopher J. Drakeley; Issaka Zongo; Jean Bosco Ouédraogo; Abdoulaye A. Djimde; Ogobara K. Doumbo; Francois Nosten; Rick M. Fairhurst; David J. Conway; Cally Roper; Taane G. Clark; London School of Hygiene & Tropical Medicine; Malawi-Liverpool-Wellcome Trust Clinical Research Programme; Liverpool School of Tropical Medicine; Wellcome Trust Research Laboratories Nairobi; Universitat Heidelberg; King Fahd University of Petroleum and Minerals; Papua New Guinea Institute of Medical Research; UCL; Institut de Recherche en Sciences de la Santé; University of Bamako Faculty of Medicine, Pharmacy and Odonto-Stomatology; Wellcome Trust Sanger Institute; Mahidol University; University of Oxford; Shoklo Malaria Research Unit; National Institute of Allergy and Infectious Diseases
13-Jun-2011Population genetic analysis of plasmodium falciparum parasites using a customized illumina goldengate genotyping assaySusana Campino; Sarah Auburn; Katja Kivinen; Issaka Zongo; Jean Bosco Ouedraogo; Valentina Mangano; Abdoulaye Djimde; Ogobara K. Doumbo; Steven M. Kiara; Alexis Nzila; Steffen Borrmann; Kevin Marsh; Pascal Michon; Ivo Mueller; Peter Siba; Hongying Jiang; Xin Zhuan Su; Chanaki Amaratunga; Duong Socheat; Rick M. Fairhurst; Mallika Imwong; Timothy Anderson; François Nosten; Nicholas J. White; Rhian Gwilliam; Panos Deloukas; Bronwyn MacInnis; Christopher I. Newbold; Kirk Rockett; Taane G. Clark; Dominic P. Kwiatkowski; Wellcome Trust Sanger Institute; Menzies School of Health Research; Institut de Recherche en Sciences de la Santé; Universita degli Studi di Roma La Sapienza; University of Bamako Faculty of Medicine, Pharmacy and Odonto-Stomatology; Wellcome Trust Research Laboratories Nairobi; Papua New Guinea Institute of Medical Research; Divine Word University; National Institute of Allergy and Infectious Diseases; National Center for Parasitology, Entomology and Malaria Control; Mahidol University; Texas Biomedical Research Institute; Shoklo Malaria Research Unit; John Radcliffe Hospital; Wellcome Trust Centre for Human Genetics; London School of Hygiene & Tropical Medicine
1-Jan-2014Whole-genome scans provide evidence of adaptive evolution in malawian Plasmodium falciparum isolatesHarold Ocholla; Mark D. Preston; Mwapatsa Mipando; Anja T.R. Jensen; Susana Campino; Bronwyn Macinnis; Daniel Alcock; Anja Terlouw; Issaka Zongo; Jean Bosco Oudraogo; Abdoulaye A. Djimde; Samuel Assefa; Ogobara K. Doumbo; Steffen Borrmann; Alexis Nzila; Kevin Marsh; Rick M. Fairhurst; Francois Nosten; Tim J.C. Anderson; Dominic P. Kwiatkowski; Alister Craig; Taane G. Clark; Jacqui Montgomery; Malawi-Liverpool-Wellcome Trust Clinical Research Programme; University of Malawi; Liverpool School of Tropical Medicine; London School of Hygiene & Tropical Medicine; Wellcome Trust Sanger Institute; Wellcome Trust Centre for Human Genetics; Kobenhavns Universitet; Copenhagen University Hospital; Institut de Recherche en Sciences de la Santé; University of Bamako; Universitat Tubingen; King Fahd University of Petroleum and Minerals; Wellcome Trust Research Laboratories Nairobi; National Institute of Allergy and Infectious Diseases; Texas Biomedical Research Institute; Nuffield Department of Clinical Medicine; Mahidol University; KEMRI/CDC Laboratories; Pennsylvania State University