Khajohn JoonlasakElizabeth M. BattyTheerarat KochakarnBhakbhoom PanthanKrittikorn KümpornsinPoramate JiaranaiArporn WangwiwatsinAngkana HuangNamfon KotananPeera Jaru-AmpornpanWudtichai ManasatienkijTreewat WatthanachockchaiKingkan RakmaneeAnthony R. JonesStefan FernandezInsee SensornSomnuek SungkanuparphEkawat PasomsubChonticha KlungthongThanat ChookajornWasun ChantratitaKhon Kaen UniversityArmed Forces Research Institute of Medical Sciences, ThailandFaculty of Medicine Ramathibodi Hospital, Mahidol UniversityMahidol UniversityThailand National Center for Genetic Engineering and BiotechnologyNuffield Department of MedicineWellcome Sanger InstituteCOVID-19 Network Investigations Alliance2022-08-042022-08-042021-01-15Virus Research. Vol.292, (2021)18727492016817022-s2.0-85097717556https://repository.li.mahidol.ac.th/handle/20.500.14594/76303Coronavirus Disease 2019 (COVID-19) is a global public health threat. Genomic surveillance of SARS-CoV-2 was implemented in March of 2020 at a major diagnostic hub in Bangkok, Thailand. Several virus lineages supposedly originated in many countries were found, and a Thai-specific lineage, designated A/Thai-1, has expanded to be predominant in Thailand. A virus sample in the SARS-CoV-2 A/Thai-1 lineage contains a frame-shift deletion at ORF7a, encoding a putative host antagonizing factor of the virus.Mahidol UniversityBiochemistry, Genetics and Molecular BiologyImmunology and MicrobiologyMedicineGenomic surveillance of SARS-CoV-2 in Thailand reveals mixed imported populations, a local lineage expansion and a virus with truncated ORF7aArticleSCOPUS10.1016/j.virusres.2020.198233