Publication:
Molecular modeling of the human hemoglobin-haptoglobin complex sheds light on the protective mechanisms of haptoglobin.

dc.contributor.authorChanin Nantasenamaten_US
dc.contributor.authorVirapong Prachayasittikulen_US
dc.contributor.authorLeif Bulowen_US
dc.contributor.otherMahidol University. Faculty of Medical Technologyen_US
dc.date.accessioned2014-01-07T05:58:20Z
dc.date.accessioned2017-06-20T16:24:50Z
dc.date.available2014-01-07T05:58:20Z
dc.date.available2017-06-20T16:24:50Z
dc.date.issued2013-04
dc.description.abstractHemoglobin (Hb) plays a critical role in human physiological function by transporting O2. Hb is safe and inert within the confinement of the red blood cell but becomes reactive and toxic upon hemolysis. Haptoglobin (Hp) is an acute-phase serum protein that scavenges Hb and the resulting Hb-Hp complex is subjected to CD163-mediated endocytosis by macrophages. The interaction between Hb and Hp is extraordinarily strong and largely irreversible. As the structural details of the human Hb-Hp complex are not yet available, this study reports for the first time on insights of the binding modalities and molecular details of the human Hb-Hp interaction by means of protein-protein docking. Furthermore, residues that are pertinent for complex formation were identified by computational alanine scanning mutagenesis. Results revealed that the surface of the binding interface of Hb-Hp is not flat and protrudes into each binding partner. It was also observed that the secondary structures at the Hb-Hp interface are oriented as coils and α-helices. When dissecting the interface in more detail, it is obvious that several tyrosine residues of Hb, particularly β145Tyr, α42Tyr and α140Tyr, are buried in the complex and protected from further oxidative reactions. Such finding opens up new avenues for the design of Hp mimics which may be used as alternative clinical Hb scavengers.en_US
dc.identifier.citationPlos One. Vol.8, No.4 (2013), 1-11en_US
dc.identifier.doi10.1371/journal.pone.0062996
dc.identifier.issn1932-6203
dc.identifier.urihttps://repository.li.mahidol.ac.th/handle/20.500.14594/2101
dc.language.isoengen_US
dc.publisherMahidol Universityen_US
dc.rightsMahidol Universityen_US
dc.rights.holderPLoS ONEen_US
dc.subjectBiochemistry simulationsen_US
dc.subjectBlood chemistryen_US
dc.subjectComputational biologyen_US
dc.subjectComputational chemistryen_US
dc.subjectMacromolecular assembliesen_US
dc.subjectMacromolecular structure analysisen_US
dc.subjectMolecular dynamicsen_US
dc.subjectMolecular mechanicsen_US
dc.subjectProtein interactionsen_US
dc.subjectProtein structureen_US
dc.titleMolecular modeling of the human hemoglobin-haptoglobin complex sheds light on the protective mechanisms of haptoglobin.en_US
dc.typeArticleen_US
dspace.entity.typePublication
mods.location.urlhttp://ehis.ebscohost.com/eds/pdfviewer/pdfviewer?sid=7ce281ce-53ee-494e-a82a-32cb909e9f85%40sessionmgr111&vid=1&hid=104

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