Publication: CADViST: Visualization tool for BLAST Alignment of Dengue virus sequences
Issued Date
2010-09-06
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2-s2.0-77956156052
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Mahidol University
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SCOPUS
Bibliographic Citation
2010 4th International Conference on Bioinformatics and Biomedical Engineering, iCBBE 2010. (2010)
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Boonyarat Viriyasaksathian, Yodchanan Wongsawat, Prapat Suriyaphol CADViST: Visualization tool for BLAST Alignment of Dengue virus sequences. 2010 4th International Conference on Bioinformatics and Biomedical Engineering, iCBBE 2010. (2010). doi:10.1109/ICBBE.2010.5515779 Retrieved from: https://repository.li.mahidol.ac.th/handle/20.500.14594/29073
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Title
CADViST: Visualization tool for BLAST Alignment of Dengue virus sequences
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Abstract
Exploration of the search engine that can simultaneously visualize the genomic sequences is one of the challenging problems. In this paper, we propose the software, called CADViST. The UnitX graphical representation (previously proposed by the authors) is employed as the alternative tool to visualize the result obtained from the Basic Local Alignment Search Tool (BLAST). The proposed software can efficiently help the users/experts to easily interpret the results, especially in Dengue virus sequence analysis where different serotypes or subtypes need to be distinguished. © 2010 IEEE.