Nucleic Acid-Based Detection of Pythium insidiosum: A Systematic Review
Issued Date
2023-01-01
Resource Type
eISSN
2309608X
Scopus ID
2-s2.0-85146754197
Journal Title
Journal of Fungi
Volume
9
Issue
1
Rights Holder(s)
SCOPUS
Bibliographic Citation
Journal of Fungi Vol.9 No.1 (2023)
Suggested Citation
Sridapan T., Krajaejun T. Nucleic Acid-Based Detection of Pythium insidiosum: A Systematic Review. Journal of Fungi Vol.9 No.1 (2023). doi:10.3390/jof9010027 Retrieved from: https://repository.li.mahidol.ac.th/handle/20.500.14594/81493
Title
Nucleic Acid-Based Detection of Pythium insidiosum: A Systematic Review
Author(s)
Author's Affiliation
Other Contributor(s)
Abstract
Pythiosis, a life-threatening infectious condition caused by Pythium insidiosum, has been increasingly reported in humans and animals worldwide. Antifungal drugs usually fail to control the pathogen. The surgical removal of an infected organ is the treatment of choice. Many affected patients die due to advanced infection. A timely and accurate diagnosis could lead to a better prognosis in pythiosis patients and save their lives. Although a standard culture method is available in microbiological laboratories, it is time-consuming, laborious, and insensitive for P. insidiosum identification. Immunological assays have been developed to improve the diagnosis of pythiosis. However, immunological methods are commercially unavailable and primarily detect anti-P. insidiosum antibodies, which constitute indirect evidence of pythiosis, making it challenging to differentiate a past from a recent infection. Moreover, such immunological tests cannot diagnose patients with a local infection, such as in the eye. Nucleic acid-based tests (NATs) are efficient for the direct and rapid detection of P. insidiosum DNA in trace-amount or culture-negative specimens. The reagents and equipment required for NATs are usually available in molecular diagnostic laboratories. Herein, we provide a systematic review to comprehensively present the principal and clinical usages, advantages, and limitations of such NATs in the detection of P. insidiosum. Various NATs have been established to detect P. insidiosum, which can be classified into amplification-based (i.e., PCR assays, isothermal tests, and next-generation sequencing methods) and non-amplification-based (i.e., DNA hybridization) techniques. This concise review on NATs constitutes an up-to-date reference with which healthcare professionals can learn about and decide upon which detection method is suitable for their respective laboratory environments.