A systematic review of the data, methods and environmental covariates used to map Aedes-borne arbovirus transmission risk

dc.contributor.authorLim A.Y.
dc.contributor.authorJafari Y.
dc.contributor.authorCaldwell J.M.
dc.contributor.authorClapham H.E.
dc.contributor.authorGaythorpe K.A.M.
dc.contributor.authorHussain-Alkhateeb L.
dc.contributor.authorJohansson M.A.
dc.contributor.authorKraemer M.U.G.
dc.contributor.authorMaude R.J.
dc.contributor.authorMcCormack C.P.
dc.contributor.authorMessina J.P.
dc.contributor.authorMordecai E.A.
dc.contributor.authorRabe I.B.
dc.contributor.authorReiner R.C.
dc.contributor.authorRyan S.J.
dc.contributor.authorSalje H.
dc.contributor.authorSemenza J.C.
dc.contributor.authorRojas D.P.
dc.contributor.authorBrady O.J.
dc.contributor.otherMahidol University
dc.date.accessioned2023-10-29T18:01:51Z
dc.date.available2023-10-29T18:01:51Z
dc.date.issued2023-12-01
dc.description.abstractBackground: Aedes (Stegomyia)-borne diseases are an expanding global threat, but gaps in surveillance make comprehensive and comparable risk assessments challenging. Geostatistical models combine data from multiple locations and use links with environmental and socioeconomic factors to make predictive risk maps. Here we systematically review past approaches to map risk for different Aedes-borne arboviruses from local to global scales, identifying differences and similarities in the data types, covariates, and modelling approaches used. Methods: We searched on-line databases for predictive risk mapping studies for dengue, Zika, chikungunya, and yellow fever with no geographical or date restrictions. We included studies that needed to parameterise or fit their model to real-world epidemiological data and make predictions to new spatial locations of some measure of population-level risk of viral transmission (e.g. incidence, occurrence, suitability, etc.). Results: We found a growing number of arbovirus risk mapping studies across all endemic regions and arboviral diseases, with a total of 176 papers published 2002–2022 with the largest increases shortly following major epidemics. Three dominant use cases emerged: (i) global maps to identify limits of transmission, estimate burden and assess impacts of future global change, (ii) regional models used to predict the spread of major epidemics between countries and (iii) national and sub-national models that use local datasets to better understand transmission dynamics to improve outbreak detection and response. Temperature and rainfall were the most popular choice of covariates (included in 50% and 40% of studies respectively) but variables such as human mobility are increasingly being included. Surprisingly, few studies (22%, 31/144) robustly tested combinations of covariates from different domains (e.g. climatic, sociodemographic, ecological, etc.) and only 49% of studies assessed predictive performance via out-of-sample validation procedures. Conclusions: Here we show that approaches to map risk for different arboviruses have diversified in response to changing use cases, epidemiology and data availability. We identify key differences in mapping approaches between different arboviral diseases, discuss future research needs and outline specific recommendations for future arbovirus mapping.
dc.identifier.citationBMC Infectious Diseases Vol.23 No.1 (2023)
dc.identifier.doi10.1186/s12879-023-08717-8
dc.identifier.eissn14712334
dc.identifier.scopus2-s2.0-85174503799
dc.identifier.urihttps://repository.li.mahidol.ac.th/handle/123456789/90826
dc.rights.holderSCOPUS
dc.subjectMedicine
dc.titleA systematic review of the data, methods and environmental covariates used to map Aedes-borne arbovirus transmission risk
dc.typeArticle
mu.datasource.scopushttps://www.scopus.com/inward/record.uri?partnerID=HzOxMe3b&scp=85174503799&origin=inward
oaire.citation.issue1
oaire.citation.titleBMC Infectious Diseases
oaire.citation.volume23
oairecerif.author.affiliationMahidol Oxford Tropical Medicine Research Unit
oairecerif.author.affiliationOxford Social Sciences Division
oairecerif.author.affiliationInstitute for Health Metrics and Evaluation
oairecerif.author.affiliationKing Saud bin Abdulaziz University for Health Sciences
oairecerif.author.affiliationCenters for Disease Control and Prevention San Juan
oairecerif.author.affiliationLondon School of Hygiene & Tropical Medicine
oairecerif.author.affiliationUniversity of Cambridge
oairecerif.author.affiliationUmeå Universitet
oairecerif.author.affiliationUniversity of Washington School of Medicine
oairecerif.author.affiliationSahlgrenska Akademin
oairecerif.author.affiliationOrganisation Mondiale de la Santé
oairecerif.author.affiliationUniversity of Oxford
oairecerif.author.affiliationNational University of Singapore
oairecerif.author.affiliationImperial College London
oairecerif.author.affiliationUniversity of Florida
oairecerif.author.affiliationStanford University
oairecerif.author.affiliationNuffield Department of Medicine
oairecerif.author.affiliationPrinceton University

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