PseudoCell: Hard Negative Mining as Pseudo Labeling for Deep Learning-Based Centroblast Cell Detection
Issued Date
2024-01-01
Resource Type
eISSN
26441276
Scopus ID
2-s2.0-85194834959
Journal Title
IEEE Open Journal of Engineering in Medicine and Biology
Rights Holder(s)
SCOPUS
Bibliographic Citation
IEEE Open Journal of Engineering in Medicine and Biology (2024)
Suggested Citation
Seesawad N., Ittichaiwong P., Sudhawiyangkul T., Sawangjai P., Thuwajit P., Boonsakan P., Sripodok S., Veerakanjana K., Charngkaew K., Pongpaibul A., Angkathunyakul N., Hnoohom N., Yuenyong S., Thuwajit C., Wilaiprasitporn T. PseudoCell: Hard Negative Mining as Pseudo Labeling for Deep Learning-Based Centroblast Cell Detection. IEEE Open Journal of Engineering in Medicine and Biology (2024). doi:10.1109/OJEMB.2024.3407351 Retrieved from: https://repository.li.mahidol.ac.th/handle/20.500.14594/98649
Title
PseudoCell: Hard Negative Mining as Pseudo Labeling for Deep Learning-Based Centroblast Cell Detection
Corresponding Author(s)
Other Contributor(s)
Abstract
<italic>Background:</italic> Deep learning models for patch classification in whole-slide images (WSI) have shown promise in assisting follicular lymphoma grading. However, these models often require pathologists to identify centroblasts and manually provide refined labels for model optimization. <italic>Objective:</italic> To address this limitation, we propose <italic>PseudoCell</italic>, an object detection framework for automated centroblast detection in WSI, eliminating the need for extensive pathologist's refined labels. <italic>Methods:</italic> <italic>PseudoCell</italic> leverages a combination of pathologist-provided centroblast labels and pseudo-negative labels generated from undersampled false-positive predictions based on cell morphology features. This approach reduces the reliance on time-consuming manual annotations. <italic>Results:</italic> Our framework significantly reduces the workload for pathologists by accurately identifying and narrowing down areas of interest containing centroblasts. Depending on the confidence threshold, <italic>PseudoCell</italic> can eliminate 58.18-99.35% of irrelevant tissue areas on WSI, streamlining the diagnostic process. <italic>Conclusion:</italic> This study presents <italic>PseudoCell</italic> as a practical and efficient prescreening method for centroblast detection, eliminating the need for refined labels from pathologists. The discussion section provides detailed guidance for implementing <italic>PseudoCell</italic> in clinical practice.
